Academic-led infrastructure to scale free open neuroimaging data

Brain models need scale. The scans already exist.

Scaling Neuro helps academic labs easily share their already collected fMRI, eventually unlocking the world's largest trainable neuroimaging dataset. Point it at a DICOM folder and it finds the EPI series, removes identifying metadata locally, and syncs the deidentified DICOMs to a shared archive.

From the researchers behind MindEye, CortexMAE, and Brainmarks

The scale opportunity

If 20 centers join our effort, we'd share more data than OpenNeuro and UKBB combined every 2 years.

OpenNeuro and UK BioBank are two of the largest sources of accessible fMRI data, sharing ~25K and ~14K hours of scanning respectively. More than 1,000 hours of fMRI are routinely collected every year at many universities. At that pace, 20 participating centers could contribute more data than OpenNeuro and UKBB combined every two years.

All public fMRI released ~85,000 hours
OpenNeuro 25K UKBB 14K HCP-YA 2K ABCD 24K Other 20K
22 centers in 4 years simply sharing data that already would be collected regardless ~88,000 hours
Today
Current fMRI foundation models are not good enough to be widely used.
At scale
Future foundation models can become broadly useful to fMRI researchers.

Dotted curve extends the data-scaling trend reported in CortexMAE.

How it works

Share approved fMRI from your lab.

01 · Workstation

Find

Walk one folder recursively and identify functional EPI time series from DICOM metadata.

03 · Shared archive

Sync

Upload one deidentified DICOM archive per EPI series with resumable transfers and content hashes.

04 · Open access

Use

Researchers receive personal archive access under the same no-identification, no-reidentification, and no-contact rules that bind Scaling Neuro staff.

All BOLD fMRI data is welcome. By only uploading raw functional scans that have identifiable metadata removed locally, we avoid all the friction associated with uploading brain scans. No task labels mean your study can't be scooped. No structurals mean no worrying about defacing. No BIDS, so no need to do anything other than point a script to a folder of DICOMs. *Note: Scaling Neuro serves a very different purpose to OpenNeuro; we hope you upload your raw data here and then upload standardized data over there!

# macOS or Linux
$ curl -fsSL https://scalingneuro.org/install.sh | sh
 neuro-sync 0.6.2 downloaded and SHA-256 verified

# See every command and option
$ neuro-sync help

# One command to find, de-identify, and sync
$ neuro-sync SOURCE

# Or, two commands to find + de-identify,
# then review locally before syncing
$ neuro-sync prepare SOURCE --output REVIEW
 Nothing uploaded; inspect or edit REVIEW
$ neuro-sync upload REVIEW
$ neuro-sync SOURCE

Reading DICOMs                  complete
Functional EPI series          4
Other series left local        11
Deidentified EPI archives      uploaded

Status: complete
Receipt: 4 EPI series safely stored
Original DICOMs: unchanged

Your original DICOMs are never changed. neuro-sync selects only functional EPI series and removes identifying metadata locally before anything is uploaded. The prepare command uploads nothing, so you can inspect or edit the deidentified copies in REVIEW. The upload command then rechecks those current files and syncs them. Scanner-native Pixel Data is preserved and is not defaced. Each accepted series is stored as one compressed DICOM archive using resumable, size- and SHA-256-verified transfer. Non-EPI or rejected series remain local, and Scaling Neuro does not preprocess or analyze scans.

macOS, Windows, and Linux · functional EPI DICOM sync

Access data

Join the open data effort.

Archive access is available to everyone who fills out the form. Scaling Neuro promises that contributed datasets will remain in the open research commons and will never be reserved or gated for exclusive commercial or private access. Every archive will be in the public domain under CC0 1.0. You must promise not to try to identify or contact participants, and to report any observed identification risks of uploaded data. Following access request, we will email your personal access token to your work address.

Do you plan to contribute data?

Your work email is used only to administer archive access and coordinate this effort.